wub.parsers package

Submodules

wub.parsers.blastn module

Parser functions for blastn outfmt 6.

wub.parsers.blastn.parse_coords(input_object)

Parse coordinates file produced by blastn outfmt 6.

Parameters:input_object – Input path or file hanlder. Returns:List of dictionaries with parsed records. Return type:list

wub.parsers.mummer module

Parser functions for mummer.

wub.parsers.mummer.parse_coords(input_object)

Parse coordinates file produced by mummer.

Parameters:input_object – Input path or file hanlder. Returns:List of dictionaries with parsed records. Return type:list

Module contents